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Breast cancer single-cell whole genome sequencing: BioProject supporting "Novel insights into breast cancer copy number genetic heterogeneity revealed by single-cell genome sequencing"
- Description
Single-cell genome sequencing of breast cancer. Raw sequence reads from 2,040 SRA experiments based on 18 BioSamples. This data was generated for the study "Novel insights into breast cancer copy number genetic heterogeneity revealed by single-cell genome sequencing." Published in eLife.
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Breast NeoplasmsWhole Genome Sequencing
- Access Rights
- Free to All
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Listeria seeligeri LS46 and LS59 Genome sequencing and assembly
- Description
BioProject description: "Genome sequencing of Listeria seeligeri LS46 and LS59". The whole genome sequencing of these listeriaphage enabled researchers to discover that AcrVIA1, an anti-CRISPR protein, interacts with the guide-exposed face of Cas13a, a (crRNA)-guided nuclease, preventing access to the target RNA and the conformational changes required for nuclease activation. A single dose of AcrVIA1...
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ListeriaSequence AnalysisWhole Genome Sequencing
- Access Rights
- Free to All
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Dnmt3a regulates myeloproliferation and liver-specific homing and expansion of hematopoietic stem and progenitor cells (Bisulfite-Seq)
- Authors
- Guryanova, OlgaSpitzer, BarbaraGarrett-Bakelman, FrancineLevine, Ross L.
- Description
Summary from GEO: "DNMT3A mutations are observed in myeloid malignancies, including myeloproliferative neoplasms (MPN), myelodysplastic syndromes (MDS), and acute myeloid leukemia (AML). Here we investigated the impact of conditional hematopoietic Dnmt3a loss on disease phenotype in primary mice. Dnmt3a ablation led to a lethal, fully penetrant myeloproliferative neoplasm with myelodysplasia (MDS/MPN)...
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DNA Methyltransferase 3AHematopoiesisHepatomegalyLeukemia, Myeloid, AcuteMyelodysplastic SyndromesTranscriptomeWhole Genome Sequencing
- Access Rights
- Free to All